Phytozome Tutorial from David Goodstein
... functional annotation or consensus sequence similarity). The site also provides direct and uniform access to much of the information associated with the individual genomes (e.g, annotations, deflines, functional assignments, sequences). A uniform browsing environment (using GMOD’s Gbrowse browser) i ...
... functional annotation or consensus sequence similarity). The site also provides direct and uniform access to much of the information associated with the individual genomes (e.g, annotations, deflines, functional assignments, sequences). A uniform browsing environment (using GMOD’s Gbrowse browser) i ...
Abnormalities of epidermal differentiation associated with
... the suprabasal layers; however it appears likely that the viral episome is present within cells of the basal layer, where early gene products might act to interfere with the normal control of cell proliferation and differentiation (Pfister, 1984; Howley et al., 1986). Common warts on other regions o ...
... the suprabasal layers; however it appears likely that the viral episome is present within cells of the basal layer, where early gene products might act to interfere with the normal control of cell proliferation and differentiation (Pfister, 1984; Howley et al., 1986). Common warts on other regions o ...
Interacting Gene Clusters and the Evolution of the Vertebrate
... were more conserved than randomly sampled pairs of human genes separated by ,1 Mbp (P 5 0.024, 1-tailed Kolmogorov–Smirnov test; fig. 4C). This demonstrates that the clusters identified in the human genome are more conserved than expected and that this is not a consequence of the degree of conservat ...
... were more conserved than randomly sampled pairs of human genes separated by ,1 Mbp (P 5 0.024, 1-tailed Kolmogorov–Smirnov test; fig. 4C). This demonstrates that the clusters identified in the human genome are more conserved than expected and that this is not a consequence of the degree of conservat ...
Isolation and Characterization of Chromosome-Gain and Increase-in-Ploidy Mutants in Yeast.
... We have developed a colony papillation assay for monitoring the copy number of genetically marked chromosomesZZ and ZZZ in Saccharomyces cereuisiae. The unique feature of this assay is that it allows detection of a gain of the marked chromosomes even if there is a gain of the entire set of chromosom ...
... We have developed a colony papillation assay for monitoring the copy number of genetically marked chromosomesZZ and ZZZ in Saccharomyces cereuisiae. The unique feature of this assay is that it allows detection of a gain of the marked chromosomes even if there is a gain of the entire set of chromosom ...
PDF - WashU Epigenome Browser
... bisulfite sequencing experiments. It distinguishes cytosine methylation levels (as bar plots) on separate strands and in different sequence contexts and integrates sequencing read depth (as curves) as a measure of confidence. ...
... bisulfite sequencing experiments. It distinguishes cytosine methylation levels (as bar plots) on separate strands and in different sequence contexts and integrates sequencing read depth (as curves) as a measure of confidence. ...
Discovery of MLL1 binding units, their localization to CpG Islands
... specific and nonredundant activities that impact downstream regulatory functions [27]. Colony forming ability ...
... specific and nonredundant activities that impact downstream regulatory functions [27]. Colony forming ability ...
Gene Mapping, Marker-Assisted Selection, Gene Cloning, Genetic
... These projects are dependent upon one another so that the maximum benefits will be obtained by using the integrated genetic improvement approaches. For instance, gene mapping will produce more economically important genes for cloning and application in biotechnology or gene-assisted selection (GAS), ...
... These projects are dependent upon one another so that the maximum benefits will be obtained by using the integrated genetic improvement approaches. For instance, gene mapping will produce more economically important genes for cloning and application in biotechnology or gene-assisted selection (GAS), ...
Where Is DNA Found?
... DNA degraded to fragments only a few hundred base pairs in length can serve as effective templates for amplification. Large numbers of copies of specific DNA sequences can be amplified simultaneously with multiplex PCR reactions. Commercial kits are now available for easy PCR reaction setup and ampl ...
... DNA degraded to fragments only a few hundred base pairs in length can serve as effective templates for amplification. Large numbers of copies of specific DNA sequences can be amplified simultaneously with multiplex PCR reactions. Commercial kits are now available for easy PCR reaction setup and ampl ...
gene mapping, marker gene mapping, marker-assisted
... These projects are dependent upon one another so that the maximum benefits will be obtained by using the integrated genetic improvement approaches. For instance, gene mapping will produce more economically important genes for cloning and application in biotechnology or gene-assisted selection (GAS), ...
... These projects are dependent upon one another so that the maximum benefits will be obtained by using the integrated genetic improvement approaches. For instance, gene mapping will produce more economically important genes for cloning and application in biotechnology or gene-assisted selection (GAS), ...
Effects of Genic Base Composition on Growth Rate in G+C
... the frequencies of each mutation (Sueoka 1962; Freese 1962). Recent comparisons of closely related genomes indicate that, for most genomes, the input of new mutations would not produce the observed base compositions. In general, new mutations would almost universally result in genomes that are more ...
... the frequencies of each mutation (Sueoka 1962; Freese 1962). Recent comparisons of closely related genomes indicate that, for most genomes, the input of new mutations would not produce the observed base compositions. In general, new mutations would almost universally result in genomes that are more ...
Breeding Corn
... A form of a gene…An organism has two copies of the gene for each of its traits. ...
... A form of a gene…An organism has two copies of the gene for each of its traits. ...
The molecular genetics lab at Umeå
... the laboratory of more or less free will, they were seldom forced too and left for other positions, although some of them would certainly have stayed, if offered a safer position or felt more confident in their future position, and some experienced short episodes of unemployment. It can be claimed t ...
... the laboratory of more or less free will, they were seldom forced too and left for other positions, although some of them would certainly have stayed, if offered a safer position or felt more confident in their future position, and some experienced short episodes of unemployment. It can be claimed t ...
4.3 Ch.14_Lecture_Presentation_Mendel
... For example, the four phenotypes of the ABO blood group in humans are determined by three alleles for the enzyme (I) that attaches A or B carbohydrates to red blood cells: IA, IB, and i. The enzyme encoded by the IA allele adds the A carbohydrate, whereas the enzyme encoded by the IB allele adds the ...
... For example, the four phenotypes of the ABO blood group in humans are determined by three alleles for the enzyme (I) that attaches A or B carbohydrates to red blood cells: IA, IB, and i. The enzyme encoded by the IA allele adds the A carbohydrate, whereas the enzyme encoded by the IB allele adds the ...
A Generic Parallel Genetic Algorithm
... These landscapes can have surprisingly complex topographies. For a simple problem of two variables (adjustable parameters), the fitness landscape can be viewed as a three-dimensional plot showing the variation of the fitness for varying input parameters. This plot can have a number of peaks (maxima) ...
... These landscapes can have surprisingly complex topographies. For a simple problem of two variables (adjustable parameters), the fitness landscape can be viewed as a three-dimensional plot showing the variation of the fitness for varying input parameters. This plot can have a number of peaks (maxima) ...
Ascidian embryogenesis and the origins of the chordate body plan
... of transgcnic DNA and RNA into de\ eloping embryos. hlosaic incorporation is not ~1prohlcm in this system because of the small number of clca\~ges involved in the formation of adwnccd-stage embryos. ‘liansgenesis has been wed to characterize &rcgulatory I)NA elements that mediate tissue-specific and ...
... of transgcnic DNA and RNA into de\ eloping embryos. hlosaic incorporation is not ~1prohlcm in this system because of the small number of clca\~ges involved in the formation of adwnccd-stage embryos. ‘liansgenesis has been wed to characterize &rcgulatory I)NA elements that mediate tissue-specific and ...
Chapter 3
... Selection mechanism sensitive for converging populations with close fitness values Generational population model (step 5 in SGA repr. cycle) can be improved with explicit survivor selection ...
... Selection mechanism sensitive for converging populations with close fitness values Generational population model (step 5 in SGA repr. cycle) can be improved with explicit survivor selection ...
lectureFeb27
... operon • Distinguish between positive and negative transcriptional regulation • Make predictions based on hypotheses • Infer protein function from mutant phenotype Pages 519-525 of textbook ...
... operon • Distinguish between positive and negative transcriptional regulation • Make predictions based on hypotheses • Infer protein function from mutant phenotype Pages 519-525 of textbook ...
DOC - MU Gene Zoos and Crop Gardens
... that are transmitted by these insects. Dense pubescence results in stems and leaves with a greater than normal amounts of pubescence. Soybean growth habit is controlled by two genes. One gene determines if the plant possesses the indeterminate (Dt1Dt1) growth habit (as in Clark) or determinate (dt1d ...
... that are transmitted by these insects. Dense pubescence results in stems and leaves with a greater than normal amounts of pubescence. Soybean growth habit is controlled by two genes. One gene determines if the plant possesses the indeterminate (Dt1Dt1) growth habit (as in Clark) or determinate (dt1d ...
Linkage Analysis and Mapping
... • Recombination is caused by formation of chiasmata along the chromosome at multiple points. • If the distance between two genes is large enough, there can potentially be multiple chiasmata formation between them; – so there could be multiple crossovers. • What would happen if there were two crossov ...
... • Recombination is caused by formation of chiasmata along the chromosome at multiple points. • If the distance between two genes is large enough, there can potentially be multiple chiasmata formation between them; – so there could be multiple crossovers. • What would happen if there were two crossov ...
Modulation of base excision repair of 8
... S1). Vectors containing the modified 50 -UTR will be further referred to as pZAJ-5w and pZAJ-5c. Similarly, the vectors with modified 30 -UTR were named pZAJ-3w and pZAJ-3c. Tandem Nb.BsrDI sites of each of the four vectors were used to swap the enclosed 18-nt fragment of the native DNA strand for a s ...
... S1). Vectors containing the modified 50 -UTR will be further referred to as pZAJ-5w and pZAJ-5c. Similarly, the vectors with modified 30 -UTR were named pZAJ-3w and pZAJ-3c. Tandem Nb.BsrDI sites of each of the four vectors were used to swap the enclosed 18-nt fragment of the native DNA strand for a s ...
Feb 27 lecture presentation
... • What mutations in the lac operon cause “supersuppressed” phenotype? ...
... • What mutations in the lac operon cause “supersuppressed” phenotype? ...
From Genes to Proteins
... base-pairs with another nucleic acid. transcription A gene’s instructions for making a protein are coded in the translation sequence of nucleotides in the gene. The instructions for making a gene expression protein are transferred from a gene to an RNA molecule in a process RNA polymerase called tra ...
... base-pairs with another nucleic acid. transcription A gene’s instructions for making a protein are coded in the translation sequence of nucleotides in the gene. The instructions for making a gene expression protein are transferred from a gene to an RNA molecule in a process RNA polymerase called tra ...
Deoxyribonucleic Acid Base Composition of Acetic
... On physiological and biochemical grounds P. morganii had previously been thought to be only remotely related to the other species ‘vulgaris ’ and ‘mirabilis ’ and a new genus Morganella had even been proposed for it (Fulton, 1943). The genus Bacillus offers another example where base composition ten ...
... On physiological and biochemical grounds P. morganii had previously been thought to be only remotely related to the other species ‘vulgaris ’ and ‘mirabilis ’ and a new genus Morganella had even been proposed for it (Fulton, 1943). The genus Bacillus offers another example where base composition ten ...
Gene Section EXT2 (exostoses (multiple) 2) Atlas of Genetics and Cytogenetics
... is malignant transformation of an osteochondroma (exostosis) into chondrosarcoma, which is estimated to occur in 1-5% of the HME cases. Cytogenetics 11p rearrangement was found in 1 sporadic osteochondroma (exostosis) using cytogenetic analysis; loss of heterozygosity at the EXT2 locus was absent in ...
... is malignant transformation of an osteochondroma (exostosis) into chondrosarcoma, which is estimated to occur in 1-5% of the HME cases. Cytogenetics 11p rearrangement was found in 1 sporadic osteochondroma (exostosis) using cytogenetic analysis; loss of heterozygosity at the EXT2 locus was absent in ...
Split hand/foot malformation genetics supports the chromosome 7
... components of the hypothetical SSIS mechanism proposed for limb development. The mechanism is advanced for the developmental regulation of the DLX5 (i.e. SHFM1) locus of Chr. 7 in the distal and proximal tissue fates—producing deterministic cell and its daughter cells produced during limb developmen ...
... components of the hypothetical SSIS mechanism proposed for limb development. The mechanism is advanced for the developmental regulation of the DLX5 (i.e. SHFM1) locus of Chr. 7 in the distal and proximal tissue fates—producing deterministic cell and its daughter cells produced during limb developmen ...
Genetic engineering
Genetic engineering, also called genetic modification, is the direct manipulation of an organism's genome using biotechnology. It is therefore a set of technologies used to change the genetic makeup of cells, including the transfer of genes within and across species boundaries to produce improved or novel organisms. New DNA may be inserted in the host genome by first isolating and copying the genetic material of interest using molecular cloning methods to generate a DNA sequence, or by synthesizing the DNA, and then inserting this construct into the host organism. Genes may be removed, or ""knocked out"", using a nuclease. Gene targeting is a different technique that uses homologous recombination to change an endogenous gene, and can be used to delete a gene, remove exons, add a gene, or introduce point mutations.An organism that is generated through genetic engineering is considered to be a genetically modified organism (GMO). The first GMOs were bacteria generated in 1973 and GM mice in 1974. Insulin-producing bacteria were commercialized in 1982 and genetically modified food has been sold since 1994. Glofish, the first GMO designed as a pet, was first sold in the United States December in 2003.Genetic engineering techniques have been applied in numerous fields including research, agriculture, industrial biotechnology, and medicine. Enzymes used in laundry detergent and medicines such as insulin and human growth hormone are now manufactured in GM cells, experimental GM cell lines and GM animals such as mice or zebrafish are being used for research purposes, and genetically modified crops have been commercialized.