Gene list - Bioinformatics.ca
... if only portion of the total gene complement is queried (or available for annotation), only use that population as background. • To test for enrichment of more than one independent types of annotation (red vs black and circle vs square), apply Fisher’s exact test separately for each type. ***More on ...
... if only portion of the total gene complement is queried (or available for annotation), only use that population as background. • To test for enrichment of more than one independent types of annotation (red vs black and circle vs square), apply Fisher’s exact test separately for each type. ***More on ...
Genomic Survey and Gene Expression Analysis
... The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes. The bZIP proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region. They have ...
... The basic leucine (Leu) zipper (bZIP) proteins compose a family of transcriptional regulators present exclusively in eukaryotes. The bZIP proteins characteristically harbor a bZIP domain composed of two structural features: a DNA-binding basic region and the Leu zipper dimerization region. They have ...
computation for chIP-seq and rNA-seq studies
... on (i) achieving sufficient enrichment of factor-bound chromatin relative to nonspecific chromatin background and (ii) obtaining sufficient enriched chromatin so that each sequence obtained is from a different founder molecule in the ChIP reaction (in other words, that the molecular library has adeq ...
... on (i) achieving sufficient enrichment of factor-bound chromatin relative to nonspecific chromatin background and (ii) obtaining sufficient enriched chromatin so that each sequence obtained is from a different founder molecule in the ChIP reaction (in other words, that the molecular library has adeq ...
Association genetics of complex traits in conifers
... identified in tomatoes and maize [8,9]. Species of the forest tree genus Populus also possess many of these attributes but, as yet, QTLs have not been positionally cloned in these species. By contrast, it is not possible to clone QTLs positionally in conifers. Genome sizes are large [10], there are ...
... identified in tomatoes and maize [8,9]. Species of the forest tree genus Populus also possess many of these attributes but, as yet, QTLs have not been positionally cloned in these species. By contrast, it is not possible to clone QTLs positionally in conifers. Genome sizes are large [10], there are ...
Comparative Bacterial Genomics Genome Databases
... sequences for a given organism. The NCBI page has information about on-going projects (unfinished genomes) and finished projects (complete genomes). Another database within NCBI that holds genome sequences is called RefSeq, which is "a comprehensive, integrated, non-redundant, well-annotated set of ...
... sequences for a given organism. The NCBI page has information about on-going projects (unfinished genomes) and finished projects (complete genomes). Another database within NCBI that holds genome sequences is called RefSeq, which is "a comprehensive, integrated, non-redundant, well-annotated set of ...
EXTENDED CONCEPT OF KNOWLEDGE FOR EVOLUTIONARY
... we know enough about our world to be able to act in it. The ability to act successfully presupposes the knowledge how to act successfully. Discoursive linguistically expressed justification is not always necessary — if the ability to act is (successfully) demonstrated, no argument can overcome this ...
... we know enough about our world to be able to act in it. The ability to act successfully presupposes the knowledge how to act successfully. Discoursive linguistically expressed justification is not always necessary — if the ability to act is (successfully) demonstrated, no argument can overcome this ...
SEGREGATION RATIOS–general reference
... • Normally, two of the four chromosomes end up together in a gamete, reducing the genetic content in half. With double reduction gametes, the two chromosomes in the gamete are the same, at least at some loci; i.e., they are sister chromatids, and genetic content is reduced to ¼ when compared to the ...
... • Normally, two of the four chromosomes end up together in a gamete, reducing the genetic content in half. With double reduction gametes, the two chromosomes in the gamete are the same, at least at some loci; i.e., they are sister chromatids, and genetic content is reduced to ¼ when compared to the ...
Proposed alignment of helical interruptions in the two subunits of the
... chain. Our alignment is based upon (i) beginning the alignment at the nucleation point, and (ii) maximizing the length of the Gly-X-Y repeats between the interruptions. In addition, by using the human cri (IV) collagen sequence (fig.1 from the Nterminus to point B), we find that interruption no.1 in ...
... chain. Our alignment is based upon (i) beginning the alignment at the nucleation point, and (ii) maximizing the length of the Gly-X-Y repeats between the interruptions. In addition, by using the human cri (IV) collagen sequence (fig.1 from the Nterminus to point B), we find that interruption no.1 in ...
Chapter Outline
... parents to offspring. • When mutations occur, modified DNA molecules are transmitted to the offspring. • Over time, mutations accumulate and the DNA sequence is changed; chromosomal rearrangements may also occur. l • Molecular evolution underlies the evolution of organisms. © John Wiley & Sons, ...
... parents to offspring. • When mutations occur, modified DNA molecules are transmitted to the offspring. • Over time, mutations accumulate and the DNA sequence is changed; chromosomal rearrangements may also occur. l • Molecular evolution underlies the evolution of organisms. © John Wiley & Sons, ...
Fig. 4 - Cambridge University Press
... known hamster sequences when other species were used to obtain primers for unpublished hamster gene sequences. Statistical analysis From each group of ten hamsters, we obtained a complete set of results for seven to eight hamsters. Although partial least square (PLS) statistical methods (see explana ...
... known hamster sequences when other species were used to obtain primers for unpublished hamster gene sequences. Statistical analysis From each group of ten hamsters, we obtained a complete set of results for seven to eight hamsters. Although partial least square (PLS) statistical methods (see explana ...
fog-1, a Regulatory Gene Required for Specification of
... transformed: cells that would normally make sperm differentiate as oocytes. However, the somatic tissues of fog-1 mutants remain unaffected. All fog-I alleles identified confer the same phenotype. T h e fog-1 mutations appear to reduce fog-l function, indicating that thewild-typefog-1 product is req ...
... transformed: cells that would normally make sperm differentiate as oocytes. However, the somatic tissues of fog-1 mutants remain unaffected. All fog-I alleles identified confer the same phenotype. T h e fog-1 mutations appear to reduce fog-l function, indicating that thewild-typefog-1 product is req ...
Slides, one per page - Bioinformatics and Research Computing
... – FASTQ Quality Filter: Filters sequences based on quality – FASTQ Quality Trimmer: Trims (cuts) sequences based on ...
... – FASTQ Quality Filter: Filters sequences based on quality – FASTQ Quality Trimmer: Trims (cuts) sequences based on ...
Life 9e - Garvness
... Textbook Reference: 14.1 What Is the Evidence that Genes Code for Proteins? Page: 292 Bloom’s Category: 1. Remembering 5. After irradiating Neurospora, Beadle and Tatum collected mutants that would a. not grow on a minimal medium but would grow on a minimal medium with arginine. b. grow on any minim ...
... Textbook Reference: 14.1 What Is the Evidence that Genes Code for Proteins? Page: 292 Bloom’s Category: 1. Remembering 5. After irradiating Neurospora, Beadle and Tatum collected mutants that would a. not grow on a minimal medium but would grow on a minimal medium with arginine. b. grow on any minim ...
Slide 1
... Sex-Linked Inheritance For example, humans have three genes responsible for color vision, all located on the X chromosome. In males, a defective allele for any of these genes results in colorblindness, an inability to distinguish certain colors. The most common form, red-green colorblindness, occurs ...
... Sex-Linked Inheritance For example, humans have three genes responsible for color vision, all located on the X chromosome. In males, a defective allele for any of these genes results in colorblindness, an inability to distinguish certain colors. The most common form, red-green colorblindness, occurs ...
Horizontal Gene Transfer between Bacteria
... Viruses that infect prokaryotes; can integrate into the host genome and then be vehicles for horizontal gene transfer Self-transferable conjugative elements that integrate into the genome of new hosts like temperate bacteriophages; may promote the mobilisation of genomic islands by utilising conserv ...
... Viruses that infect prokaryotes; can integrate into the host genome and then be vehicles for horizontal gene transfer Self-transferable conjugative elements that integrate into the genome of new hosts like temperate bacteriophages; may promote the mobilisation of genomic islands by utilising conserv ...
Understanding Patterns of Inheritance Through Pedigree
... taught, usually sex-linked traits. This lesson was designed to break up this sequence and link the student understanding of inheritance to pedigrees first, and then move toward specific analyses of inheritance with Punnett squares. As students have just finished studying asexual and sexual reproduct ...
... taught, usually sex-linked traits. This lesson was designed to break up this sequence and link the student understanding of inheritance to pedigrees first, and then move toward specific analyses of inheritance with Punnett squares. As students have just finished studying asexual and sexual reproduct ...
The Genetics of Microcephaly
... Some knowledge of genetics and inheritance is needed to understand origins of genetic microcephaly. Each body tissue is composed of billions of cells that carry the fundamental units of inheritance called genes. About 20,000 of these genes contain all the instructions required to make an individual ...
... Some knowledge of genetics and inheritance is needed to understand origins of genetic microcephaly. Each body tissue is composed of billions of cells that carry the fundamental units of inheritance called genes. About 20,000 of these genes contain all the instructions required to make an individual ...
publication
... Informatics database map and the Davis Human/Mouse homology map have been made by identifying human orthologs to mapped mouse genes (8). Detailed characterizations of disease regions are increasingly being done through mouse–human genomic comparisons aimed at identifying novel genes and regulatory e ...
... Informatics database map and the Davis Human/Mouse homology map have been made by identifying human orthologs to mapped mouse genes (8). Detailed characterizations of disease regions are increasingly being done through mouse–human genomic comparisons aimed at identifying novel genes and regulatory e ...
Gene list - Bioinformatics.ca
... if only portion of the total gene complement is queried (or available for annotation), only use that population as background. • To test for enrichment of more than one independent types of annotation (red vs black and circle vs square), apply Fisher’s exact test separately for each type. ***More on ...
... if only portion of the total gene complement is queried (or available for annotation), only use that population as background. • To test for enrichment of more than one independent types of annotation (red vs black and circle vs square), apply Fisher’s exact test separately for each type. ***More on ...
Pierce5e_ch24_lecturePPT
... • Continuous (Quantitative) characteristics vary along a scale of measurement with many overlapping phenotypes • The Relationship Between Genotype and Phenotype • Types of Quantitative Characteristics • Polygenic Inheritance ...
... • Continuous (Quantitative) characteristics vary along a scale of measurement with many overlapping phenotypes • The Relationship Between Genotype and Phenotype • Types of Quantitative Characteristics • Polygenic Inheritance ...
Representing and solving complex DNA identification cases
... for paternity testing. Then the possibility of non-paternity can itself perturb estimates [12]. We can use essentially the same network to develop estimation methods that properly correct for this [7]. 5. Null alleles A bnullQ (or bdrop-outQ) allele is one that is not recorded by the equipment used. ...
... for paternity testing. Then the possibility of non-paternity can itself perturb estimates [12]. We can use essentially the same network to develop estimation methods that properly correct for this [7]. 5. Null alleles A bnullQ (or bdrop-outQ) allele is one that is not recorded by the equipment used. ...
BIO301 - National Open University of Nigeria
... The Hardy-Weinberg "equilibrium" refers to this stability of allele frequencies over time. A second component of the Hardy-Weinberg principle concerns the effects of a single generation of random mating. In this case, the genotype frequencies can be predicted from the allele frequencies. For example ...
... The Hardy-Weinberg "equilibrium" refers to this stability of allele frequencies over time. A second component of the Hardy-Weinberg principle concerns the effects of a single generation of random mating. In this case, the genotype frequencies can be predicted from the allele frequencies. For example ...
Protocols for 16S rDNA Array Analyses of Microbial
... DNA Microarray Analyses SigmaScreen (Sigma) or CMT-GAPS (Corning Inc., Corning, New York) coated slides for microarrays may be used for the DNA array hybridization experiments. One µl (100 pmol/µl) of the complementary primers containing a 15-mer poly T tail at the 5’-end is spotted on the slide. ...
... DNA Microarray Analyses SigmaScreen (Sigma) or CMT-GAPS (Corning Inc., Corning, New York) coated slides for microarrays may be used for the DNA array hybridization experiments. One µl (100 pmol/µl) of the complementary primers containing a 15-mer poly T tail at the 5’-end is spotted on the slide. ...
Results - BioMed Central
... little thick after 15 days, at this point, the inoculated tissue surface was covered with ...
... little thick after 15 days, at this point, the inoculated tissue surface was covered with ...
Gene
A gene is a locus (or region) of DNA that encodes a functional RNA or protein product, and is the molecular unit of heredity. The transmission of genes to an organism's offspring is the basis of the inheritance of phenotypic traits. Most biological traits are under the influence of polygenes (many different genes) as well as the gene–environment interactions. Some genetic traits are instantly visible, such as eye colour or number of limbs, and some are not, such as blood type, risk for specific diseases, or the thousands of basic biochemical processes that comprise life.Genes can acquire mutations in their sequence, leading to different variants, known as alleles, in the population. These alleles encode slightly different versions of a protein, which cause different phenotype traits. Colloquial usage of the term ""having a gene"" (e.g., ""good genes,"" ""hair colour gene"") typically refers to having a different allele of the gene. Genes evolve due to natural selection or survival of the fittest of the alleles.The concept of a gene continues to be refined as new phenomena are discovered. For example, regulatory regions of a gene can be far removed from its coding regions, and coding regions can be split into several exons. Some viruses store their genome in RNA instead of DNA and some gene products are functional non-coding RNAs. Therefore, a broad, modern working definition of a gene is any discrete locus of heritable, genomic sequence which affect an organism's traits by being expressed as a functional product or by regulation of gene expression.