1471-2164-10-531-S3
... from the 5th exon from the 3’ end. As shown in the figure above, the most abundant tag was always the 4 th tag from the 3’ end which is directly upstream of the poly-A site a. The second most abundant tag was the 3’ most tag and is directly upstream of poly-A site b. ...
... from the 5th exon from the 3’ end. As shown in the figure above, the most abundant tag was always the 4 th tag from the 3’ end which is directly upstream of the poly-A site a. The second most abundant tag was the 3’ most tag and is directly upstream of poly-A site b. ...
Evolution of the defensin-like gene family in grass genomes
... Gramineae, including brachypodium, rice, maize and sorghum were identified based on bioinformatics methods. Using the synteny analysis method, we found that 21 DEFL genes formed 30 pairs of duplicated blocks that have undergone large-scale duplication events, mostly occurring between species. In part ...
... Gramineae, including brachypodium, rice, maize and sorghum were identified based on bioinformatics methods. Using the synteny analysis method, we found that 21 DEFL genes formed 30 pairs of duplicated blocks that have undergone large-scale duplication events, mostly occurring between species. In part ...
attribute_selection
... selection is done using the learning algorithm as a black box. Ron Kohavi, George H. John (1997). Wrappers for feature subset selection. Artificial Intelligence. 97(1-2):273-324. N. Gagunashvili (UNAK & MPIK) ...
... selection is done using the learning algorithm as a black box. Ron Kohavi, George H. John (1997). Wrappers for feature subset selection. Artificial Intelligence. 97(1-2):273-324. N. Gagunashvili (UNAK & MPIK) ...
Understanding Evolution Reading Assignment
... Misconceptions about natural selection Because natural selection can produce amazing adaptations, it's tempting to think of it as an all-powerful force, urging organisms on, constantly pushing them in the direction of progress — but this is not what natural selection is like at all. First, natural s ...
... Misconceptions about natural selection Because natural selection can produce amazing adaptations, it's tempting to think of it as an all-powerful force, urging organisms on, constantly pushing them in the direction of progress — but this is not what natural selection is like at all. First, natural s ...
Physical Mapping I
... • Generally used to resolve regions much larger than 1 Mb (e.g. whole chromosomes) • Map is created by fragmenting the DNA molecule using restriction enzymes and then looking for overlaps The pieces are too big to sequence, so this is not the same problem as fragment assembly! ...
... • Generally used to resolve regions much larger than 1 Mb (e.g. whole chromosomes) • Map is created by fragmenting the DNA molecule using restriction enzymes and then looking for overlaps The pieces are too big to sequence, so this is not the same problem as fragment assembly! ...
Dissecting the regulatory architecture of gene
... per individual. For each of 8,526 expressed genes we tested for eQTLs at all SNPs between 100 kb upstream of the TSS and 100 kb downstream of the transcription end site (nearly all of the compelling signals of eQTLs in this data set lie within this region [14,15]). In an initial analysis, we used st ...
... per individual. For each of 8,526 expressed genes we tested for eQTLs at all SNPs between 100 kb upstream of the TSS and 100 kb downstream of the transcription end site (nearly all of the compelling signals of eQTLs in this data set lie within this region [14,15]). In an initial analysis, we used st ...
copenhagen 1996
... individual, solution (point of the solution space) genes represent internal structure of a solution ...
... individual, solution (point of the solution space) genes represent internal structure of a solution ...
Meiosis and Genetics
... What is one advantage and disadvantage of asexual reproduction? What is one advantage and disadvantage of sexual reproduction? How does meiosis ensure genetic diversity? When does independent assortment and crossing over occur during ...
... What is one advantage and disadvantage of asexual reproduction? What is one advantage and disadvantage of sexual reproduction? How does meiosis ensure genetic diversity? When does independent assortment and crossing over occur during ...
Test cross
... - tests the unknown genotype with the known to determine the unknown genotype A/? (not sure if AA or Aa) - must show the dominant phenotype for one or more gene loci - use a tester individual, which is known to carry only the recessive alleles of the genes in question a/a -> The idea here is to reve ...
... - tests the unknown genotype with the known to determine the unknown genotype A/? (not sure if AA or Aa) - must show the dominant phenotype for one or more gene loci - use a tester individual, which is known to carry only the recessive alleles of the genes in question a/a -> The idea here is to reve ...
Mendel`s Hypotheses – Mendelian Theory of Heredity
... When gametes fuse, the offspring has_____ factors (now called ________ for each trait. ...
... When gametes fuse, the offspring has_____ factors (now called ________ for each trait. ...
ab initio - Ware Lab
... BAC clones comprising approximately 2 billion non-redundant bases, all available via GenBank. Annotation of this first draft, using both ab initio gene prediction and evidence-based approaches, gives preliminary estimates of gene numbers, many of which produce alternative transcripts. Comparison to ...
... BAC clones comprising approximately 2 billion non-redundant bases, all available via GenBank. Annotation of this first draft, using both ab initio gene prediction and evidence-based approaches, gives preliminary estimates of gene numbers, many of which produce alternative transcripts. Comparison to ...
De novo assembled expressed gene catalog of a
... derived from six tissues of a Eucalyptus grandis x E. urophylla F1 hybrid clone and filtered to exclude low quality and ribosomal RNA-derived reads. Supplemental Table S2. The complete gene catalog from Arabidopsis thaliana (TAIR 9) was used to query the EucALL dataset and the Velvet assembled datas ...
... derived from six tissues of a Eucalyptus grandis x E. urophylla F1 hybrid clone and filtered to exclude low quality and ribosomal RNA-derived reads. Supplemental Table S2. The complete gene catalog from Arabidopsis thaliana (TAIR 9) was used to query the EucALL dataset and the Velvet assembled datas ...
Independent Assortment
... In meiosis II, the cells divide again. Notice that there are equal proportions of gamete genotypes. One fourth are dominant R, dominant Y; one fourth are recessive s, recessive y; one fourth are dominant R, recessive y; and one fourth are recessive r, dominant Y. On average, half the cells that unde ...
... In meiosis II, the cells divide again. Notice that there are equal proportions of gamete genotypes. One fourth are dominant R, dominant Y; one fourth are recessive s, recessive y; one fourth are dominant R, recessive y; and one fourth are recessive r, dominant Y. On average, half the cells that unde ...
Cultural transmission of fitness - Université Paris-Sud
... finite size of populations. Drift will be more rapid when population size is small. It is a force that reduces diversity because it leads to either fixation or elimination of alleles. Mutation: the creation of new alleles caused by errors in the DNA replication process. Contrary to drift, it is a fo ...
... finite size of populations. Drift will be more rapid when population size is small. It is a force that reduces diversity because it leads to either fixation or elimination of alleles. Mutation: the creation of new alleles caused by errors in the DNA replication process. Contrary to drift, it is a fo ...
LECTURE 1 INTRODUCTION Origin of word: Algorithm The word
... and attempt to fine-tune its performance by applying clever coding trick s or by implementing it on the most expensive and fastest machines around to boost performance as much as possible. The problem is that if the underlying design is bad, then often no amount of fine-tuning is going to make a sub ...
... and attempt to fine-tune its performance by applying clever coding trick s or by implementing it on the most expensive and fastest machines around to boost performance as much as possible. The problem is that if the underlying design is bad, then often no amount of fine-tuning is going to make a sub ...
Using gene networks to drug target identification
... gaining popularity as methods improve and as more data become available. In order to draw meaningful inferences from gene expression data and find regulatory relationships between genes, it is important that each gene is surveyed under several different conditions, preferably in the form of expressi ...
... gaining popularity as methods improve and as more data become available. In order to draw meaningful inferences from gene expression data and find regulatory relationships between genes, it is important that each gene is surveyed under several different conditions, preferably in the form of expressi ...
Molecular Detection of Virulence Genes Associated with
... Klebsiella species are gram negative, medium sized rods (0.40.6 x 2-3 μm). They are facultative anaerobic, fermentative, catalase positive, oxidase negative lactose fermenters, reduce nitrate to nitrite and are motile by peritrichous flagella. They are capable of growth on non-enriched media such as ...
... Klebsiella species are gram negative, medium sized rods (0.40.6 x 2-3 μm). They are facultative anaerobic, fermentative, catalase positive, oxidase negative lactose fermenters, reduce nitrate to nitrite and are motile by peritrichous flagella. They are capable of growth on non-enriched media such as ...
ch. 14 Mendelian Genetics notes
... 1. Parents pass on discrete inheritable factors (genes) to their offspring 2. These factors remain as separate factors from one generation to the next ...
... 1. Parents pass on discrete inheritable factors (genes) to their offspring 2. These factors remain as separate factors from one generation to the next ...
EVOLUTIONARY ECOLOGY SOME USEFUL DEFINITIONS
... development of the nervous system, muscles and structure of the individual. 2. Within a population many genes are present in two or more alternative forms, or alleles, which code for slightly different forms of the same protein. These will cause differences in development and so there will be variat ...
... development of the nervous system, muscles and structure of the individual. 2. Within a population many genes are present in two or more alternative forms, or alleles, which code for slightly different forms of the same protein. These will cause differences in development and so there will be variat ...
Chromosome Variations
... chromosome. This condition is called euploid. • If the organism is supposed to be diploid but instead has a different number of chromosome sets (such as triploid), it is abnormal euploid. • Having an extra chromosome (trisomic) or missing a chromosome (monosomic) is very bad, usually lethal. The chr ...
... chromosome. This condition is called euploid. • If the organism is supposed to be diploid but instead has a different number of chromosome sets (such as triploid), it is abnormal euploid. • Having an extra chromosome (trisomic) or missing a chromosome (monosomic) is very bad, usually lethal. The chr ...
File
... - Individuals with harmful mutation will be eliminated. - Individuals with beneficial mutation on the other hand may leave more offspring than normal individuals. ...
... - Individuals with harmful mutation will be eliminated. - Individuals with beneficial mutation on the other hand may leave more offspring than normal individuals. ...
chapter 19 the organization and control of eukaryotic genomes
... Gene expression must be controlled on a long-term basis during cellular differentiation, the divergence in form and function as cells in a multicellular organism specialize. Differential gene expression is the expression of different genes by cells with the same genome. A typical human cell prob ...
... Gene expression must be controlled on a long-term basis during cellular differentiation, the divergence in form and function as cells in a multicellular organism specialize. Differential gene expression is the expression of different genes by cells with the same genome. A typical human cell prob ...