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20060710_GOannotCamp_Stanford
20060710_GOannotCamp_Stanford

... 1. Generate a list of human genes involved in human diseases  OMIM, other sources 2. Translation of this list to orthologous genes in MODs  Starting point: InParanoid, Homologene, TreeFam  Get intersection of genes from three approaches and use these  This is not necessarily a complete set but i ...
Elke Winterhager (Ed.) Gap Junctions in Development
Elke Winterhager (Ed.) Gap Junctions in Development

... be mediated via protein–protein interactions at the C-terminus of the connexin. Thus, there is a need to discriminate between channel and protein function. Impairment of development and diseases need not be based on connexin mutations, but rather on wrong signaling mediated via protein– protein inte ...
Triple-hit lymphoma
Triple-hit lymphoma

... lymphoma was diagnosed using morphology, flow cytometry, immunochemistry, and cytogenetics. Since many triple-hit lymphomas have not been documented in the literature, it is important to bring attention to this entity, as this lymphoma has different prognostic and therapeutic implications than other ...
Creatine Deficiency Syndromes
Creatine Deficiency Syndromes

... Tests which are useful in screening for creatine defects in patients with suspected creatine deficiency syndromes include:  Proton MRS —absence or reduction of creatine signal in the brains of affected individuals  Measurement of metabolites—guanidinoacetate (GAA), creatine and creatinine in uri ...
BIO 201 - Southern Union State Community College
BIO 201 - Southern Union State Community College

... SLO Course Student Learning Outcomes / Competencies / Objectives 1.Describe the structure of the neurons 2. Distinguish between types of neurons 3. Explain how receptors function and how sensations are identified 4. Identify the functions and parts of the brain 5. Describe the anatomy and distributi ...
How to obtain and recognize partial-diploid strains that are duplicated... chromosome segments.
How to obtain and recognize partial-diploid strains that are duplicated... chromosome segments.

... Experiments can be designed to allow recognition of duplication progeny by marker phenotype. (This is especially useful with unstable duplications that break down to give fertile heterokaryons). If a duplication-generating strain that carries a recessive marker located in the translocated segment is ...
Oligogenic basis of isolated gonadotropin
Oligogenic basis of isolated gonadotropin

... in the present cohort, the higher the number of affected genes and alleles that an individual harbored, the more likely he or she was to have isolated GnRH deficiency manifested as IHH as opposed to a milder or partial phenotype, such as delayed puberty, anosmia, or cleft lip/palate (Fig. S2A, pedigr ...
Marwa Yahia Ahmed_o
Marwa Yahia Ahmed_o

... In normal conditions, IL-1Ra is known to be involved in health maintenance by masking coexisting IL-1 activity in tissue. The major biological role of extracellular sIL1Ra isoform is to compete with IL-1 agonists for binding to cell surface receptors, thus modulating their effect. Whereas, the intra ...
Chapter 10: Sexual Reproduction and Genetics
Chapter 10: Sexual Reproduction and Genetics

Full text
Full text

... Credit risk assessment, credit scoring and loan applications approvals are typical tasks that can be performed using machine learning or data mining techniques. Hence a lot of research has been carried out in this area. Chen et al. [7] use a two-stage approach composed of k-means clustering and supp ...
20. Transposable Genetic Elements
20. Transposable Genetic Elements

... white mottling caused by the loss of the C allele through chromosome breakage in some of the cell lines within the seed, with the resultant expression of the recessive c. Because of the clonal nature of cell growth in the seed, the size of a white patch is an indication of when in the seed's develop ...
DECISION MAKER`S PREFERENCES, AIRPORT GATE
DECISION MAKER`S PREFERENCES, AIRPORT GATE

... Way 1. The components of a vector of concessions specify concessions the decision maker is willing to make with respect to ̂ . The components of the vector can be defined in absolute values (“the decision maker is willing to make a concession of units on the value ̂ ”) or in relative values (“the de ...
Cascade and Feed Forward Back propagation Artificial Neural
Cascade and Feed Forward Back propagation Artificial Neural

... Ready Mix Concrete(RMC) have been carried out using Feed forward back propagation and Cascade forward back propagation algorithms. The study was conducted by varying the number of neuron in the hidden layer using tansigmoidal transfer function. Various models have been developed for different input ...
Identification of chromosome intervals from 129 and C57BL/6 mouse
Identification of chromosome intervals from 129 and C57BL/6 mouse

... and Yaa disease-susceptibility genes.12–14 Not surprisingly important effects of the genetic background on the expression of autoimmunity have also been reported in gene-targeted mice.5,15,16 For example, C1q deficiency, a condition that in humans is strongly associated with the development of a lup ...
Microgeographic adaptation and the spatial scale of evolution
Microgeographic adaptation and the spatial scale of evolution

... response to environmental variation constitutes a foundational research program for evolutionary ecologists working across diverse systems [1,2]. Local adaptation occurs when a population evolves traits that support higher fitness in its home environment relative to populations from foreign environm ...
Quantitative trait loci and the study of plant domestication
Quantitative trait loci and the study of plant domestication

... should have made the domestication of sunflower simpler. Again, however, if adaptation depends predominantly on standing variation rather than novel mutations, theory suggests that recessive alleles for DRT would be more likely to be fixed than nonrecessive ones (Orr & Betancourt, 2001). Until more da ...
Classification of Clustered Microcalcifications using Resilient
Classification of Clustered Microcalcifications using Resilient

... many problems [6, 21, 22]. Mainly Backpropagation training algorithm, Batch Gradient Descent, is commonly used. Main disadvantage of such algorithm is that it is too slow for classification of MCCs as benign or malignant. In this paper, Resilient Backpropagation training algorithm is investigated fo ...
Microgeographic adaptation and the spatial scale of evolution
Microgeographic adaptation and the spatial scale of evolution

... response to environmental variation constitutes a foundational research program for evolutionary ecologists working across diverse systems [1,2]. Local adaptation occurs when a population evolves traits that support higher fitness in its home environment relative to populations from foreign environm ...
The Diversity of Life
The Diversity of Life

... 1. What re the advantages of sexual reproduction? Lesson 4 1. How are traits inherited? 2. Give an example where many genes influence a single trait. 3. Give an example of one gene influencing more than one trait? 4. How can the environment influence traits? 5. Jenny, Jenny’s mom, and Jenny’s grandf ...
Click
Click

... in the gene and its vicinity, and 7) the available Genetic Tests for disease-causing variations. And this is not all of the information we can locate in this way. As we become more sophistocated genomic biologists we will find much more information of use concerning how the gene works/doesn’t work l ...
Pathways - Bioinformatics.ca
Pathways - Bioinformatics.ca

... • Given a genomic sequence, we can infer what metabolic pathways are available to an organism • Used to design culture medium for Tropheryma whipplei by seeing what nutrients were essential for growth (Renesto et al., Lancet, 362, 447-449, 2003) ...
Drosophila melanogaster
Drosophila melanogaster

... Selectively breeding of plants and animals to produce more useful hybrids had been done many years ago by farmers and herders. However, there was no accuracy in results because they did not know the concept regarding inheritance. Information about genetic mechanisms was gathered through laboratory b ...
Methods to Evolve Legal Phenotypes
Methods to Evolve Legal Phenotypes

... This ‘genetic engineering’ approach ensures that all solutions will satisfy all constraints, but may damage epistatic genotypes, discarding the result of careful evolution over many generations. In addition, the design of the repair procedure may be a non-trivial task for some problems. C5: LEGAL MA ...
Analysis of Clines with Variable Selection and Variable Migration
Analysis of Clines with Variable Selection and Variable Migration

... evolution. Life-history theory has emphasized various aspects of dispersal: age and sex differences, spatial and temporal variability, seasonal and directional migration (from wintering to breeding grounds, philopatric behavior, etc.; see, e.g., Greenwood and Harvey 1982; Stinner et al. 1983; Swingl ...
Using GO to improve text information access
Using GO to improve text information access

... An ontology represents “what there is” in a domain. An ontology includes a vocabulary (which promotes a standard way of naming the concepts of the domain) and a system of hierarchical and other relations between and among the concepts and the vocabulary items. The ConverSpeech ontology – BioMedPlus ...
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Gene expression programming

In computer programming, gene expression programming (GEP) is an evolutionary algorithm that creates computer programs or models. These computer programs are complex tree structures that learn and adapt by changing their sizes, shapes, and composition, much like a living organism. And like living organisms, the computer programs of GEP are also encoded in simple linear chromosomes of fixed length. Thus, GEP is a genotype-phenotype system, benefiting from a simple genome to keep and transmit the genetic information and a complex phenotype to explore the environment and adapt to it.
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