plotfold
... Using energy minimization criteria, any predicted "optimal" secondary structure for an RNA or DNA molecule depends on the model of folding and the specific folding energies used to calculate that structure. Different optimal foldings may be calculated if the folding energies are changed even slightl ...
... Using energy minimization criteria, any predicted "optimal" secondary structure for an RNA or DNA molecule depends on the model of folding and the specific folding energies used to calculate that structure. Different optimal foldings may be calculated if the folding energies are changed even slightl ...
Protein Sulfenylation in Mitochondria: Biochemistry and
... these positions. Cysteine oxidation processes serve many different purposes but in general two different functional roles can be distinguished (Fig. 1). In some cellular compartments such as in the bacterial periplasm, the endoplasmic reticulum (ER) and the intermembrane space of mitochondria (IMS), ...
... these positions. Cysteine oxidation processes serve many different purposes but in general two different functional roles can be distinguished (Fig. 1). In some cellular compartments such as in the bacterial periplasm, the endoplasmic reticulum (ER) and the intermembrane space of mitochondria (IMS), ...
Molecular Plant Microbe Interactions
... the ORF2 putative protein, the analysis revealed 14 hydrophobic domains that may form transmembrane α-helical segments, which is a pattern also conserved in EmrB (Lomovskaya and Lewis 1992) and VceB (Colmer et al. 1998) (data not shown). Based on the similarity in sequence, length, hydropathy plots, ...
... the ORF2 putative protein, the analysis revealed 14 hydrophobic domains that may form transmembrane α-helical segments, which is a pattern also conserved in EmrB (Lomovskaya and Lewis 1992) and VceB (Colmer et al. 1998) (data not shown). Based on the similarity in sequence, length, hydropathy plots, ...
Novel domains and orthologues of eukaryotic
... and Caenorhabditis elegans ZK973.1 are signi®cantly more sequence similar to bacterial Tex (~35% pairwise sequence identity) than are Spt6p homologues (~25%). Moreover, these three eukaryotic proteins share the same CSZ and S1 domain architecture and predicted catalytic residues in their YqgF domain ...
... and Caenorhabditis elegans ZK973.1 are signi®cantly more sequence similar to bacterial Tex (~35% pairwise sequence identity) than are Spt6p homologues (~25%). Moreover, these three eukaryotic proteins share the same CSZ and S1 domain architecture and predicted catalytic residues in their YqgF domain ...
Intestinal absorption of amino acids and peptides
... another does not necessarily mean that they share the same carrier. T h e interaction may be allosteric - due to attachment of an amino acid to one carrier site inducing configurational changes in another adjacent carrier (Reiser & Christiansen, I 969) or even due to competition for energy supply. I ...
... another does not necessarily mean that they share the same carrier. T h e interaction may be allosteric - due to attachment of an amino acid to one carrier site inducing configurational changes in another adjacent carrier (Reiser & Christiansen, I 969) or even due to competition for energy supply. I ...
McDougall, K. J. and V. W. Woodword. Suppression
... c are present in nearly equal concentrations. The ratio of iso-I-cytochrome c to iso-2-cytochrome c increases until ire-1-cytochrome c is the predominant form in the l23-hour culture. Older cultures of wild type also contain only iso-I-cytochrome c. While the poky cytochrome c undergoes this sequent ...
... c are present in nearly equal concentrations. The ratio of iso-I-cytochrome c to iso-2-cytochrome c increases until ire-1-cytochrome c is the predominant form in the l23-hour culture. Older cultures of wild type also contain only iso-I-cytochrome c. While the poky cytochrome c undergoes this sequent ...
TR04_TrophAmine sellsheet rev6.indd
... Septic. The constant risk of sepsis is present during central venous nutrition. Since contaminated solutions and infusion catheters are potential sources of infection, it is imperative that the preparation of parenteral nutrition solutions and the placement and care of catheters be accomplished unde ...
... Septic. The constant risk of sepsis is present during central venous nutrition. Since contaminated solutions and infusion catheters are potential sources of infection, it is imperative that the preparation of parenteral nutrition solutions and the placement and care of catheters be accomplished unde ...
Application A1049
... different end uses, when the fatty acid profile is similar. Furthermore, the dietary modelling assessment for A1018 has been conducted excluding the impact of margarine as a source of oleic acid. This difference, along with comment made above concerning the use of overseas dietary intake assessments ...
... different end uses, when the fatty acid profile is similar. Furthermore, the dietary modelling assessment for A1018 has been conducted excluding the impact of margarine as a source of oleic acid. This difference, along with comment made above concerning the use of overseas dietary intake assessments ...
Structural diversity of band 4.1 superfamily members
... the N-terminal half). This product was named merlin (moesinezrin-radixin-like protein). In addition to band 4.1 protein and ERM family, talin also belongs to the band 4.1 superfamily (Rees et al., 1990). Talin is a protein with a molecular mass of ~200 kDa, which is concentrated at the undercoat of ...
... the N-terminal half). This product was named merlin (moesinezrin-radixin-like protein). In addition to band 4.1 protein and ERM family, talin also belongs to the band 4.1 superfamily (Rees et al., 1990). Talin is a protein with a molecular mass of ~200 kDa, which is concentrated at the undercoat of ...
Molecular Weight and the Metal Amino Acid Chelate
... molecular weight of the iron sulfate can be determined, the sulfate in the starting material was included in the total weight of the product formed. The sulfate should not have been counted in the weight of the chelate even though most so-called chelate manufacturers do not take the trouble to remov ...
... molecular weight of the iron sulfate can be determined, the sulfate in the starting material was included in the total weight of the product formed. The sulfate should not have been counted in the weight of the chelate even though most so-called chelate manufacturers do not take the trouble to remov ...
Department of Chemistry and Clinical Biochemistry
... take an integrated test before taking the final exam. The student is entitled to repeat this test once in case he/she fails it. 2.7. In case of less than 40 points gained by a student, he/she is allowed to make up the chosen control tests in order to reach the level of 56 points before taking the in ...
... take an integrated test before taking the final exam. The student is entitled to repeat this test once in case he/she fails it. 2.7. In case of less than 40 points gained by a student, he/she is allowed to make up the chosen control tests in order to reach the level of 56 points before taking the in ...
Poster
... of the CaaX box motif to Ftase. By inhibiting the farnesylation of the Pre-Lamin A protein, it is mislocalized away from the nucleus. These inhibitors have recently been shown to prevent the formation of misshapen nuclei in mouse fibroblasts containing a targeted progeria syndrome mutation. ...
... of the CaaX box motif to Ftase. By inhibiting the farnesylation of the Pre-Lamin A protein, it is mislocalized away from the nucleus. These inhibitors have recently been shown to prevent the formation of misshapen nuclei in mouse fibroblasts containing a targeted progeria syndrome mutation. ...
Department of Chemistry and Clinical Biochemistry
... take an integrated test before taking the final exam. The student is entitled to repeat this test once in case he/she fails it. 2.7. In case of less than 40 points gained by a student, he/she is allowed to make up the chosen control tests in order to reach the level of 56 points before taking the in ...
... take an integrated test before taking the final exam. The student is entitled to repeat this test once in case he/she fails it. 2.7. In case of less than 40 points gained by a student, he/she is allowed to make up the chosen control tests in order to reach the level of 56 points before taking the in ...
Coarse-grained normal mode analysis in structural biology
... Overview of various methodologies and applications to the GroEL–GroES complex of EN models. The EN model (b) requires an initial input structure, typically an atomic-resolution structure such as in (a), colored according to secondary structure elements. As noted in the text, a lower-resolution struc ...
... Overview of various methodologies and applications to the GroEL–GroES complex of EN models. The EN model (b) requires an initial input structure, typically an atomic-resolution structure such as in (a), colored according to secondary structure elements. As noted in the text, a lower-resolution struc ...
An acidic region of the 89K murine cytomegalovirus immediate early
... acids of pp89 can be deleted without loss of function and have no activity on their own. Since even amino acids 274 to 476 can be deleted without complete loss of binding activity, the DNA-binding region should be located in the C-terminal third of pp89. In good agreement with this explanation was t ...
... acids of pp89 can be deleted without loss of function and have no activity on their own. Since even amino acids 274 to 476 can be deleted without complete loss of binding activity, the DNA-binding region should be located in the C-terminal third of pp89. In good agreement with this explanation was t ...
Both DRIs and RDAs refer to long-term average daily nutrient intake
... the main charbohydrat in diet is starch>>true dietary fibers are good source of energy>>false,,because they are undigestable the main role of amino acids is to supply body with glucose by converting>>false,,and this is the sparing effect Dietary Protein 10 of the 20 amino acids needed for the synthe ...
... the main charbohydrat in diet is starch>>true dietary fibers are good source of energy>>false,,because they are undigestable the main role of amino acids is to supply body with glucose by converting>>false,,and this is the sparing effect Dietary Protein 10 of the 20 amino acids needed for the synthe ...
The DNA sequence of the gene and genetic control sites for the
... (his 0/4) and CCC (pro 0/9). With the publication of the DNA sequences of an increasing number of Bacillus genes it will become possible to assess codon usage across the genome and investigate differences between Gram-positive and Gram-negative organisms (24). (c) Transcriptional and translational s ...
... (his 0/4) and CCC (pro 0/9). With the publication of the DNA sequences of an increasing number of Bacillus genes it will become possible to assess codon usage across the genome and investigate differences between Gram-positive and Gram-negative organisms (24). (c) Transcriptional and translational s ...
Review: Protein and Energy in Shrimp Feeds
... There is no best way to do this type of work due to the interactions of feed intake, energy/protein utilization, etc.; however: • Use of single, standard protein source in trials to maintain constant amino acid profile of protein • Digestibility coefficients of both protein and non-protein energy so ...
... There is no best way to do this type of work due to the interactions of feed intake, energy/protein utilization, etc.; however: • Use of single, standard protein source in trials to maintain constant amino acid profile of protein • Digestibility coefficients of both protein and non-protein energy so ...
What more do we need to know to optimize the
... • Lowering pH, especially in young birds, can help with protease efficacy ...
... • Lowering pH, especially in young birds, can help with protease efficacy ...
Proteins
... A major difference between polysaccharides and proteins is that plants make polysaccharides, while animals make proteins. proteins are made of monomers, while polysaccharides are ...
... A major difference between polysaccharides and proteins is that plants make polysaccharides, while animals make proteins. proteins are made of monomers, while polysaccharides are ...
Section D - Prokaryotic and Eukaryotic Chromosome Structure
... A it is antiparallel and can include nonstandard base pairs. B inosine in the 5' -anticodon position can pair with A, C or U in the 3'-codon position C inosine in the 3’-anticodon position can pair with A, C or U in the 5’-codon position. D A is never found in the 5'-anticodon position as it is modi ...
... A it is antiparallel and can include nonstandard base pairs. B inosine in the 5' -anticodon position can pair with A, C or U in the 3'-codon position C inosine in the 3’-anticodon position can pair with A, C or U in the 5’-codon position. D A is never found in the 5'-anticodon position as it is modi ...
Protein structure prediction
Protein structure prediction is the prediction of the three-dimensional structure of a protein from its amino acid sequence — that is, the prediction of its folding and its secondary, tertiary, and quaternary structure from its primary structure. Structure prediction is fundamentally different from the inverse problem of protein design. Protein structure prediction is one of the most important goals pursued by bioinformatics and theoretical chemistry; it is highly important in medicine (for example, in drug design) and biotechnology (for example, in the design of novel enzymes). Every two years, the performance of current methods is assessed in the CASP experiment (Critical Assessment of Techniques for Protein Structure Prediction). A continuous evaluation of protein structure prediction web servers is performed by the community project CAMEO3D.