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Expressed Sequence Tags
Expressed Sequence Tags

... Expressed Sequence Tags or ESTs, as the name suggests, are the new generation tools providing new dimension to transcriptome analysis. They are the tiny sequences of cistron randomly selected from genome library and can be used to identify and map the whole genome of any particular species. ESTs are ...
Variant terminology and exon numbering
Variant terminology and exon numbering

... body with respect to how exons should be numbered. In addition, there are many historical (legacy) genespecific exon numbering, or naming, schemes. In some cases, historic exon designations may be nonnumeric, thus precluding simple linear numbering as has been discussed by Dalgleish et al. (2010). T ...
Protocol for uploading gel images of PCR amplified DNA samples
Protocol for uploading gel images of PCR amplified DNA samples

... 1. Sign-in to the Sample Database: https://sampledb.dnalc.org/barcoding/ Click on the project for which you would like to upload gel images. 2. On the bar above the project info, next to “Samples,” click the “Sequencing” option. *NOTE: The “Sequencing” option will only appear once the sample minimum ...
Taq polymerase errors in PCR: Frequency and management
Taq polymerase errors in PCR: Frequency and management

... • Topic: mutations in the human adenine phosphoribosyltransferase genes = HPTR deficiency that cause a kidney disease 1. Cloning and sequencing of HPRT gene from human DNA library (reference sequence) 2. Cloning of HPRT PCR products and sequencing of 5 clones per patient from 5 patients ...
DNA Sequence Classification in the Presence of
DNA Sequence Classification in the Presence of

... Biological sequence classification is an important problem which can help biological researchers to identify regions of similarity between different sequences, predict the function of a protein motif, assign the family label to a novel sequence and dig into the evolution history of a certain biologi ...
Application of Ethical Theories to Human Genome Sequencing
Application of Ethical Theories to Human Genome Sequencing

... Against this argument, we will make two counterarguments: one from within the divine command theory and other from outside of it. From the grounds of divine command theory, it can be argued that God have given us brains to use. This is a scientific fact that when you stop using your brain, you start ...
High performance solution-based target selection using individually
High performance solution-based target selection using individually

... Foundation Medicine, Inc., Cambridge, MA ...
Agricultural Biotechnology: mainstream or misguided?
Agricultural Biotechnology: mainstream or misguided?

...  Encourages incorporation of genetics and biotechnology into the school curriculum  Teachers develop and share lesson plans on biotechnology ...
Newsletter JUNE 2014
Newsletter JUNE 2014

... value assay content, and resources to support its growing use in basic, agricultural, and clinical research. ...
Environmental DNA-Encoded Antibiotics Fasamycins A and B Inhibit
Environmental DNA-Encoded Antibiotics Fasamycins A and B Inhibit

... sample of FASII extract was used in each 50 μL reaction, and reactions were run in microcentrifuge tubes. After a preincubation with inhibitor at room temperature for 20 min, fatty acid elongation was initiated with the addition of 10 μL of dissolved C-2 labeled [14C]-malonylCoA (Perkin-Elmer 57.5 m ...
and ways to find them
and ways to find them

... Gilbert, 2007. Daphnia gene duplicates. http://wfleabase.org/genome-summaries/gene-duplicates/ Gilbert, 2008. Tandem genes lost + found. http://insects.eugenes.org/DroSpeGe/about/analysis-doc/ Manak, JR et al., 2006. .. unannotated transcription in Dros. mel. Nature Genetics, doi:10.1038/ng1875 Viei ...
How might new advances in personal genetics impact our lives, our
How might new advances in personal genetics impact our lives, our

... the DNA analysis; this often includes genetic predictions about their traits such as their genetic predisposition for various diseases. Your DNA can reveal important information about your traits. It is important to remember that your physical, mental and behavioral states are the result of complex ...
Word document - Personal Genetics Education Project
Word document - Personal Genetics Education Project

... about their traits such as their genetic predisposition for various diseases. Your DNA can reveal important information about your traits. It is important to remember that your physical, mental and behavioral states are the result of complex interactions between multiple genes in combination with yo ...
FAFLP: last word in microbial genotyping?
FAFLP: last word in microbial genotyping?

... K12 has shown that, on the ABI 377 sequencing apparatus, sizing is accurate to within one base pair [2]. Analysis of DNA from isolates of a bacterial pathogen from a suspected outbreak is based on pair-wise comparisons between the numbers of fragments ampli®ed from the DNA of each isolate, and their ...
De Novo Sequencing and Homology Search with De Novo
De Novo Sequencing and Homology Search with De Novo

... maximization, the algorithm simply tries all modified amino acids too. – The time complexity is increased by a constant factor. (Compare to the exponential growth in database search approach). ...
HiSeq Sequencing Systems
HiSeq Sequencing Systems

... The TruSeq family of reagents represents the latest advancement of Illumina’s SBS technology. Permeating the entire chemistry workflow, from library preparation through DNA sequencing, TruSeq underlies Illumina sequencing and empowers it to deliver the industry’s most accurate genomic data for a bro ...
Single Nucleotide Polymorphism (SNP)
Single Nucleotide Polymorphism (SNP)

...  coding and (mostly) noncoding regions. ...
Fact Sheet 15 | GENETIC AND GENOMIC TESTING This fact sheet
Fact Sheet 15 | GENETIC AND GENOMIC TESTING This fact sheet

... an individual’s hair, amniotic fluid or cells from chorionic villi sampling in pregnancy as well as a variety of body fluids and tissues. Looking for mutations in the genetic code (direct gene testing) If the sequence of DNA letters in a gene is not able to be read in the correct way, the protein ma ...
Recombinant_DNA-_Final_Presentation_2b
Recombinant_DNA-_Final_Presentation_2b

... insert- for gel verification and sequencing  Procedure:  Extracted plasmid and then digested it with ~3000bp XbaI and PstI  Results:  No band at 1500-1600 target range  Band should be at 2 different sizes but is only at one ...
Department of Health Information Management
Department of Health Information Management

... • Yellow: a combination of control and sample DNA, where both hybridized equally to the target DNA • Black: areas where neither the control nor sample DNA hybridized to the target DNA • The location and intensity of a color can tell us whether the gene, or mutation, is presented in either the contro ...
COPYRIGHTED MATERIAL - Beck-Shop
COPYRIGHTED MATERIAL - Beck-Shop

... and analyzing genomes. Genome analysis can be divided into structural and functional genomics. The analysis of differences among genomes of individuals of a given species is the focus of comparative genomics. The complement of messenger RNAs (mRNAs) transcribed by the cellular genome is called the t ...
Practice guidelines for the Interpretation and Reporting of
Practice guidelines for the Interpretation and Reporting of

... disease genes or disease specific. It is essential that a minimum set of standards is clearly set out in order to ensure that all patients are offered the same quality of care. 4.1 Mutation databases including LSDBs. LSDBs are an essential means of recording all variation within a gene. The most suc ...
Investigation Of Haemoglobinopathy.
Investigation Of Haemoglobinopathy.

... testing for thal is tailored to prevalent local mutations and suggested mutations on the basis of preliminary testing. ► Based on PCR which provides rapid, accurate identification of multiple single point mutations. ...
Investigation Of Haemoglobinopathy.
Investigation Of Haemoglobinopathy.

... testing for thal is tailored to prevalent local mutations and suggested mutations on the basis of preliminary testing. ► Based on PCR which provides rapid, accurate identification of multiple single point mutations. ...
ppt - Barley World
ppt - Barley World

... 1. Knowing how many genes determine a phenotype, and where the genes are located, is a first step in understanding the genetic basis of a phenotype 2. A second step is determining the sequence of the gene, or genes, determining the phenotype and understanding how the expression of the genes is regul ...
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Exome sequencing



Exome sequencing is a technique for sequencing all the protein-coding genes in a genome (known as the exome). It consists of first selecting only the subset of DNA that encodes proteins (known as exons), and then sequencing that DNA using any high throughput DNA sequencing technology. There are 180,000 exons, which constitute about 1% of the human genome, or approximately 30 million base pairs, but mutations in these sequences are much more likely to have severe consequences than in the remaining 99%. The goal of this approach is to identify genetic variation that is responsible for both mendelian and common diseases such as Miller syndrome and Alzheimer's disease without the high costs associated with whole-genome sequencing.
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