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PASSIVE TRANSPORT
PASSIVE TRANSPORT

... They are also referred to as voltage-gated channels or channels regulated by voltage. They give to the excitable cells the ability to vary in a few msec, the intracellular content of electric charges as compared to the outside. The voltage-dependent channels are so called because they open only when ...
Document
Document

... • ARE ESSENTIAL IN CELL STRUCTURE AND FUNCTION. • ENZYMES ARE PROTEINS THAT SPEED CHEMICAL REACTIONS. • TRANSPORTER PROTEINS MOVE CHEMICALS ACROSS MEMBRANES. • FLAGELLA ARE MADE OF PROTEINS. • SOME BACTERIAL TOXINS ARE PROTEINS. ...
Healthy or ill: Just a single wrong fold - Reizende DNA-labs
Healthy or ill: Just a single wrong fold - Reizende DNA-labs

... As stated before, the spatial structure of a protein is of great importance to its function, so it is useful to be able to show it. Namely, how would you know that something has changed in a structure when you don’t know what the structure is? Even if you have visualized the structure of a protein i ...
Gene Section GPC1 (glypican 1) Atlas of Genetics and Cytogenetics
Gene Section GPC1 (glypican 1) Atlas of Genetics and Cytogenetics

... Crystal structure of the N-glycosylated human Gpc-1 core protein (PDB entry 4ACR). Cartoon diagram of Gpc-1 in which the body of the structure is coloured light blue, the N-terminal helix and loop in dark blue and the C-terminal helix in red. Important loops (L1:L3) and all of the α-helices (α1:α14) ...
tuesday_lect_prot_DBs
tuesday_lect_prot_DBs

... Shamelessly copied from material done by Eija Korpelainen This also includes old material from my thesis www.hytti.uku.fi/~toronen/Gradu_verkkoon.zip and from CSC bio-opas http://www.csc.fi/oppaat/bio/ http://www.csc.fi/oppaat/bio/bio-opas.pdf ...
lecture08_06
lecture08_06

... adjacent to each other, forming beta-sheet. ...
Membrane Transport
Membrane Transport

... Valinomycin is a passive carrier for K+. It can bind or release K+ when it encounters the membrane surface. Valinomycin can catalyze net K+ transport because it can translocate either in the complexed or uncomplexed state. The direction of net flux depends on the electrochemical K+ gradient. ...
Membrane Transport
Membrane Transport

...  Na+,K+-ATPase, in plasma membranes of most animal cells is an antiport pump. It catalyzes ATP-dependent transport of Na+ out of a cell in exchange for K+ entering.  (H+, K+)-ATPase, involved in acid secretion in the stomach is an antiport pump. It catalyzes transport of H+ out of the gastric pari ...
Protein Synthesis Lab: Day #1
Protein Synthesis Lab: Day #1

... protein. Different organisms have a different number of chromosomes depending on the amount of DNA, or instructions, needed to build and keep that organism functioning. Humans normally have two sets of 23 chromosomes. One set comes from each parent with the same genes, but with different versions of ...
INTEIN MEDIATED PROTEIN SPLICING
INTEIN MEDIATED PROTEIN SPLICING

... ATG ...
IMPROVEMENT OF hGM-CSF EXPRESSION USING A FUSION
IMPROVEMENT OF hGM-CSF EXPRESSION USING A FUSION

... tracts of bacteria containing these different constructs, the highest expression was obtained in pMAL-p2, fol­ lowed by pET then pATH11 pMAL-c2, and pACT7 system. However after sonication, the supernatant was measured for expressed protein and pMAL-p2 showed highest expression, followed by pMAL-c2 a ...
3.1 Review PBS
3.1 Review PBS

... What is a mutation? How does a change in the DNA code affect the shape of a protein? • A mutation is change in one base (point mutation) or bases (frameshift mutation due to addition or deletion of base) of DNA. • This can change the codon, which then can change the amino acid(s). • If an amino aci ...
Name: Proteins Activity Amino Acids, Building Blocks of Proteins
Name: Proteins Activity Amino Acids, Building Blocks of Proteins

... 6. How does the number of hydrogen atoms compare to the number of oxygen atoms in each amino acid? _____________________________________________________ ...
O. Ugur Sezerman Sabanci University MDBF 34056 Orhanli
O. Ugur Sezerman Sabanci University MDBF 34056 Orhanli

... Based on Ligand Specific Features”, LNCS volume 4263,( 2006). Budak H., Kasap Z., Shearman R. C., Dweikat I.,Sezerman U. and Mahmood A. “Molecular Characterization of cDNA encoding resistance gene-like sequences in Buclo dactiloides”, Molecular Biotechnology. 34:293-301 ( 2006). Gul O., Calay E., Se ...
CLONING A LYSINE-RICH PROTEIN GENE FROM POTATO
CLONING A LYSINE-RICH PROTEIN GENE FROM POTATO

Protein Supplements
Protein Supplements

... contain large amounts of carbohydrate, dietary fibre, vitamins and minerals as well as protein and these foods should be included perhaps more often than at present. Foods included in the diet primarily for their carbohydrate content also make significant contributions to the overall protein intake, ...
Reconstructing phylogenetic trees for protein superfamilies
Reconstructing phylogenetic trees for protein superfamilies

... • Status quo approach to protein function prediction – Given a gene (or protein) of unknown function • Run BLAST to find homologs • Identify the top BLAST hit(s) • If the score is significant, transfer the annotation ...
ESCHERICHIA COLI
ESCHERICHIA COLI

... metabolites (organic compounds) that are not involved in the organism’s growth, development or reproduction [10, 11]. They vary structurally and most of them are distributed among a very limited number of plant species [12]. Secondary metabolites help in the plant defense system against herbivores a ...
Most molecules of human vasopressin have a net charge of _____
Most molecules of human vasopressin have a net charge of _____

... 5. Serotonin is a broad-activity neurotransmitter, well-known for its ability to improve one’s mood. Serotonin is synthesized from tryptophan. The structure of serotonin at physiological pH is shown to the right. Consider how the structural differences between serotonin and tryptophan would likely a ...
Secretion of Beta-Lactamase Requires the Carboxyl End of the Protein.
Secretion of Beta-Lactamase Requires the Carboxyl End of the Protein.

... (the b/a gene) in mutant or wild-type form. The wildtype gene was shown to specify two forms of /Ilactamase which differ in molecular weight by about 2500 daltons. This difference is consistent with removal, predicted on other grounds, of 23 aminoterminal residues (the “signal” sequence). All b/amut ...
invisible forms
invisible forms

... crystallographer  can  produce  a  three-­‐dimensional  picture  of  the  density  of  electrons   within  the  crystal.  From  this  electron  density,  the  mean  posi3ons  of   the  atoms  in  the   crystal   can   be   determined, ...
Membrane Transport - Austin Publishing Group
Membrane Transport - Austin Publishing Group

... they transport, whether they are always open or gated (open only when stimulated), and most importantly, whether a source of free energy is required for operation. ...
MSDA tutorial: How to read output Excel files obtained from GO
MSDA tutorial: How to read output Excel files obtained from GO

... http://www.geneontology.org/GO.evidence.shtml) Warning: there is more than one line in most Excel cells. List of all GO terms in the GO database that are related to the GO terms directly assigned to a given entry, but only considering ancestries (parental lineages). (see details at http://www.geneon ...
The bond in the bacteriophage 4x174 gene A protein
The bond in the bacteriophage 4x174 gene A protein

... Amino acid analysis or s~uencing of radioactive peptides which can be obtained after cleavage of the A protein-oligo~n~leotide complex with proteolytic enzymes could reveal which of the tyrosine residues in gene A protein are involved in cleavage of and binding to DNA. However, these analyses requir ...
pptx - FenyoLab.org
pptx - FenyoLab.org

... possible reactions not to dilute the cross-linked peptides. For identification of a cross-linked peptide pair, both peptides have to be sufficiently long and required to give informative fragmentation. ...
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Magnesium transporter

This page links directly from the magnesium in biological systems page.Magnesium transporters are proteins that transport magnesium across the cell membrane. All forms of life require magnesium, yet the molecular mechanisms of Mg2+ uptake from the environment and the distribution of this vital element within the organism are only slowly being elucidated.In bacteria, Mg2+ is probably mainly supplied by the CorA protein and, where the CorA protein is absent, by the MgtE protein. In yeast the initial uptake is via the Alr1p and Alr2p proteins, but at this stage the only internal Mg2+ distributing protein identified is Mrs2p. Within the protozoa only one Mg2+ transporter (XntAp) has been identified. In metazoa, Mrs2p and MgtE homologues have been identified, along with two novel Mg2+ transport systems TRPM6/TRPM7 and PCLN-1. Finally, in plants, a family of Mrs2p homologues has been identified along with another novel protein, AtMHX.
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