Protein Structure Analysis and Prediction
... Each amino acid consists of a rigid plane formed by single nitrogen, carbon, alpha-carbon (Ca), oxygen, and hydrogen atoms, and a distinguishing side chain. The backbone of a protein is the linked sequence of these rigid planes. Figure 2 shows several amino acids linked together. The individual amin ...
... Each amino acid consists of a rigid plane formed by single nitrogen, carbon, alpha-carbon (Ca), oxygen, and hydrogen atoms, and a distinguishing side chain. The backbone of a protein is the linked sequence of these rigid planes. Figure 2 shows several amino acids linked together. The individual amin ...
Metallothionein functions and structural characteristics
... p53 was observed in breast cancer epithelial cells with both wild and inactive type p53. In addition, experiments based on p53 attached to glutathione-Sepharose showed that only apo-MT1 and not MT1 forms a complex with p53. This interaction may prevent binding of p53 to DNA so that p53 may not be ab ...
... p53 was observed in breast cancer epithelial cells with both wild and inactive type p53. In addition, experiments based on p53 attached to glutathione-Sepharose showed that only apo-MT1 and not MT1 forms a complex with p53. This interaction may prevent binding of p53 to DNA so that p53 may not be ab ...
amino acid , peptide and protein metabolism
... • Common secondary structures-- alpha helix, betapleated sheet, and triple helix. • hydrogen bonds between backbone ...
... • Common secondary structures-- alpha helix, betapleated sheet, and triple helix. • hydrogen bonds between backbone ...
Nuclear Transport of Plant Potyviral Proteins
... antisera specific for Nla, Nlb, CI,helper component-proteinase, and capsid proteins. Small tobacco plants (fourleaf stage) were inoculated with TEV, and SDS-soluble protein extracts were prepared after O days, 2 days, 3 days, 4 days, 5 days, and 7 days post-inoculation (pj.). lmmunoblots were prepar ...
... antisera specific for Nla, Nlb, CI,helper component-proteinase, and capsid proteins. Small tobacco plants (fourleaf stage) were inoculated with TEV, and SDS-soluble protein extracts were prepared after O days, 2 days, 3 days, 4 days, 5 days, and 7 days post-inoculation (pj.). lmmunoblots were prepar ...
The Escherichia coli SlyD Is a Metal Ion-regulated Peptidyl
... Purification of SlyD, the N-terminal Fragment of SlyD (Amino Acids 1–146) and SlpA—SlyD was purified from overexpression cultures with a yield of 54 mg of homogenous protein/liter of culture. By silver staining, only a single band could be detected in SDS-PAGE after the last purification step. Amino ...
... Purification of SlyD, the N-terminal Fragment of SlyD (Amino Acids 1–146) and SlpA—SlyD was purified from overexpression cultures with a yield of 54 mg of homogenous protein/liter of culture. By silver staining, only a single band could be detected in SDS-PAGE after the last purification step. Amino ...
Passive Transport
... substances UP their concentration gradient. • The sodium-potassium pump is a carrier protein that actively transports three sodium ions out of the cell and two potassium ions into the cell. – This pump is one of the most important carrier proteins in animal cells. It prevents sodium ions from buildi ...
... substances UP their concentration gradient. • The sodium-potassium pump is a carrier protein that actively transports three sodium ions out of the cell and two potassium ions into the cell. – This pump is one of the most important carrier proteins in animal cells. It prevents sodium ions from buildi ...
ADP-ribosyltransferases: plastic tools for inactivating protein and
... bacterial toxins and metabolic regulators. ADPRTs catalyze the transfer of the ADP-ribose moiety from NAD+ onto specific substrates including proteins. ADP-ribosylation usually inactivates the function of the target. ADPRTs have become adapted to function in extra- and intracellular settings. Regula ...
... bacterial toxins and metabolic regulators. ADPRTs catalyze the transfer of the ADP-ribose moiety from NAD+ onto specific substrates including proteins. ADP-ribosylation usually inactivates the function of the target. ADPRTs have become adapted to function in extra- and intracellular settings. Regula ...
Full Text
... The other half of the significant correlations not displayed here, shows a dependence of amino acids at i+2 and i+5 as well. The residues at these positions have hydrophobicity opposite that at position i. This observation is consistent with the amphipathic nature of most of the α-helices in the Bro ...
... The other half of the significant correlations not displayed here, shows a dependence of amino acids at i+2 and i+5 as well. The residues at these positions have hydrophobicity opposite that at position i. This observation is consistent with the amphipathic nature of most of the α-helices in the Bro ...
Solubilization of Membrane Proteins into Functional Lipid‐Bilayer
... of DMPC being in contact with the polymer scaffolds along the rim of the nanodiscs. In sharp contrast with the situation encountered in SMALPs, the transition temperature was not downshifted upon solubilization by moderate DIBMA concentrations (Figure 3 d). This suggests much less perturbation of li ...
... of DMPC being in contact with the polymer scaffolds along the rim of the nanodiscs. In sharp contrast with the situation encountered in SMALPs, the transition temperature was not downshifted upon solubilization by moderate DIBMA concentrations (Figure 3 d). This suggests much less perturbation of li ...
Protein synthesis
... The ultimate cellular location of proteins is often determined by specific, relatively short amino acid sequence within the proteins themselves. These sequences can be responsible for proteins being secreted, imported into the nucleus or targeted to other organelles. ...
... The ultimate cellular location of proteins is often determined by specific, relatively short amino acid sequence within the proteins themselves. These sequences can be responsible for proteins being secreted, imported into the nucleus or targeted to other organelles. ...
Document
... Enterprise Vocabulary Services • Collection of services and resources that address NCI's needs for controlled vocabulary • Main vocabulary products • NCI Thesaurus • NCI Metathesaurus • http://ncimeta.nci.nih.gov • Specialty vocabularies • MMHCC (Mouse Models of Human Cancer Cons.) • CTRM (Core Term ...
... Enterprise Vocabulary Services • Collection of services and resources that address NCI's needs for controlled vocabulary • Main vocabulary products • NCI Thesaurus • NCI Metathesaurus • http://ncimeta.nci.nih.gov • Specialty vocabularies • MMHCC (Mouse Models of Human Cancer Cons.) • CTRM (Core Term ...
Detecting Constituent Sequences by Means of HP Pattern–Based
... signaling. Human Akt, has an N-terminal pleckstrin homology (PH) domain that binds to the lipid products of phosphoinositide 3-kinase (PI3K), phosphatidylinositol-3,4bisphosphate [PI(3,4)P2] and phosphatidylinositol-3,4,5trisphosphate [PI(3,4,5)P3]. This binding happens at plasma membrane level, whe ...
... signaling. Human Akt, has an N-terminal pleckstrin homology (PH) domain that binds to the lipid products of phosphoinositide 3-kinase (PI3K), phosphatidylinositol-3,4bisphosphate [PI(3,4)P2] and phosphatidylinositol-3,4,5trisphosphate [PI(3,4,5)P3]. This binding happens at plasma membrane level, whe ...
Slide
... polypeptide chain • Quaternary structure: how multiple polypeptide chains come together ...
... polypeptide chain • Quaternary structure: how multiple polypeptide chains come together ...
Cdc45: the missing RecJ ortholog in eukaryotes?
... Fig. 1. Sequence analysis of the Cdc45 and RecJ protein families. (A) Domain architecture of human Cdc45 and Escherichia coli RecJ proteins. For the E.coli RecJ protein, domains were assigned according to the RecJ core structure (Yamagata et al., 2002) and the Pfam domain database (Finn et al., 2008 ...
... Fig. 1. Sequence analysis of the Cdc45 and RecJ protein families. (A) Domain architecture of human Cdc45 and Escherichia coli RecJ proteins. For the E.coli RecJ protein, domains were assigned according to the RecJ core structure (Yamagata et al., 2002) and the Pfam domain database (Finn et al., 2008 ...
Fractal and Mathematical Morphology in Intricate
... Therefore it is evident that comparison of protein functionality requires the intricate comparison of tertiary structures. The search for an effective solution for tertiary protein structural similarity is justified because such tools can be of aid to scientists for prediction of the functions of a ...
... Therefore it is evident that comparison of protein functionality requires the intricate comparison of tertiary structures. The search for an effective solution for tertiary protein structural similarity is justified because such tools can be of aid to scientists for prediction of the functions of a ...
Analyses for Molecular Interactions in Living Cells
... YFP was rationally designed on the basis of the GFP crystal structure to red-shift the absorbance and emission spectra with respect to EGFP and other green fluorescent variants ...
... YFP was rationally designed on the basis of the GFP crystal structure to red-shift the absorbance and emission spectra with respect to EGFP and other green fluorescent variants ...
PPT
... Generation of fragment libraries from experimental structures (3 and 9 amino acids). Splicing together fragments of proteins of known structure with similar sequences. The conformational space defined by these fragments is then searched by a Monte Carlo procedure with an energy function that favors ...
... Generation of fragment libraries from experimental structures (3 and 9 amino acids). Splicing together fragments of proteins of known structure with similar sequences. The conformational space defined by these fragments is then searched by a Monte Carlo procedure with an energy function that favors ...
Protein kinase Protein kinases are enzymes that add a phosphate
... at more than one residue by a given protein kinase, and many proteins can be phosphorylated by several protein kinases. There are more genes encoding protein kinases than there are genes encoding proteins for any other family of human enzymes except proteases. Workers have identified 478 typical an ...
... at more than one residue by a given protein kinase, and many proteins can be phosphorylated by several protein kinases. There are more genes encoding protein kinases than there are genes encoding proteins for any other family of human enzymes except proteases. Workers have identified 478 typical an ...
Max ARM PDS pg1
... the ideal forms and amounts of carbohydrates to pack glycogen in muscles for maximum recovery. For maximum muscle cell carbohydrate enhancement, Max ARM provides the GLUT4 Activator Blend with banaba leaf extract (1% corosolic acid) and Promilin® (fenugreek extract, 4-hydroxyisoleucine). Promilin® f ...
... the ideal forms and amounts of carbohydrates to pack glycogen in muscles for maximum recovery. For maximum muscle cell carbohydrate enhancement, Max ARM provides the GLUT4 Activator Blend with banaba leaf extract (1% corosolic acid) and Promilin® (fenugreek extract, 4-hydroxyisoleucine). Promilin® f ...
Group 6
... In the egg whites the albumin will change from clear to white. We will explore how the following denature egg albumin as well as milk casein. When egg white is heated above a certain temperature (i.e. 60 °C) bonds in the protein molecules break and reform in different ways. This causes the protein m ...
... In the egg whites the albumin will change from clear to white. We will explore how the following denature egg albumin as well as milk casein. When egg white is heated above a certain temperature (i.e. 60 °C) bonds in the protein molecules break and reform in different ways. This causes the protein m ...
Microbiology and Yeast Cell Fermentation
... • Yeast: A general term for single-celled fungi that reproduce by budding. Yeast cells under the microscope. ...
... • Yeast: A general term for single-celled fungi that reproduce by budding. Yeast cells under the microscope. ...
Adenovirus-associated Virus Structural Protein Sequence Homology
... (unlike the helper adenovirus proteins). The amino acid composition data presented here provide more complete evidence demonstrating the similarity of the amino acid compositions of the three virion proteins. The relative concentration (mole percentage) of each amino acid is also similar for each of ...
... (unlike the helper adenovirus proteins). The amino acid composition data presented here provide more complete evidence demonstrating the similarity of the amino acid compositions of the three virion proteins. The relative concentration (mole percentage) of each amino acid is also similar for each of ...
Chapter 5: Homeostasis and Transport Lesson 5.1: Cell Structures
... There are peripheral proteins that are loosely bound to the surface of the plasma membrane or to part of an integral protein, these types of proteins can be seen in Figure 5.2 and are not actively involved in cell transport processes. Integral proteins are transmembrane proteins, which means that th ...
... There are peripheral proteins that are loosely bound to the surface of the plasma membrane or to part of an integral protein, these types of proteins can be seen in Figure 5.2 and are not actively involved in cell transport processes. Integral proteins are transmembrane proteins, which means that th ...