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Cell Function – General Membrane Transport What does the cell do = cell physiology: cell life must be maintained within a narrow range of conditions (requirements for life) 1. Membrane Transport movement of materials into and out of each cell the “external” environment changes much more drastically than internal environment 2. Secretion eg. gland cells, mucus, hormones !a cell’s survival depends on its ability to maintain this difference 3. Membrane Potential all cells hold an electrical charge across their cell membranes; some cells, eg nerve and muscle cells, can alter that charge to send impulses or to contract 1st line of defense in protecting the cell is cell membrane interface between living and nonliving 4. Cell Cycle & Cell Division DNA replication mitosis meiosis ALL living organisms possess a cell membrane The cell membrane is semipermeable (=selectively permeable) 5. Metabolism enzymes synthesis and decomposition ATP and energy use metabolic pathways major energy pathways protein synthesis ! some small molecules cross by passive diffusion ! some substances require expenditure of energy 6. Cellular Interactions also called cell signaling; how they “talk” to each other hormones, neurotransmitters, white blood cells, etc must interact with or trigger responses in cells ! some require extra “helpers” to get across 7. Cellular Control: Genes & Chromosomes Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 passive active - - Two general kinds of movement 1 Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 2 resembles ordinary diffusion works with a gradient occurs spontaneously does not require extra ATP move lipid insoluble things across membrane – they need help to cross - specific for certain solutes works against gradient requires ATP doesn’t usually occur outside living cells accelerates diffusion through membrane PASSIVE MOVEMENTS uses specific carrier molecule (=carrier protein) 1. Simple Diffusion movement of a substance down a concentration gradient may be through channels or pores created by these proteins main way small things cross membranes and move within cells and fluid compartments does not require ATP (energy) eg. absorb glucose & amino acids in intestine and kidneys materials can diffuse through air, liquids, and solids 3. Osmosis diffusion of water, across a membrane, down a water concentration gradient eg. O2 , CO2 , small molecules, lipid soluble molecules nonpolar, lipid soluble some small polar molecules hypertonic = sol has more solutes than another (eg. human cell is hypertonic to distilled water) cell does not have to expend any energy hypotonic = sol has fewer solutes than another define: solute and solvent isotonic 2. Facilitated Diffusion 4. Filtration movement of a solute across a membrane down a concentration gradient using a carrier protein Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 = solutions have equal concentrations of solutes movement of water and solutes through a 3 Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 4 membrane down a pressure gradient controlling cell volume generating body heat excitability of muscle and nerve cells hydrostatic pressure = blood pressure ~ half of calories you “burn” every day are used just to operate your Na/K pumps unidirectional (no equilibrium is reached) eg. kidney filtration to form urine 2. Vesicular Transport (=bulk transport) eg. materials leaving blood in capillary beds movement of large particles, macromolecules, and cells across membrane inside bubble-like vesicles ACTIVE MOVEMENT requires ATP 1. Active Transport (=solute pumping) several kinds of vesicular transport: movement of a solute across a membrane up a concentration gradient using ATP and a protein carrier a. Exocytosis moves substances out of cell secretory cells, gland cells requires energy (ATP) and protein carriers eg. how golgi bodies secrete things very specific b. Endocytosis moves substances into cell cell membrane forms vesicle around material and pinches off to form vacuole moves specific solutes against (up) concentration gradient =physiological pump kinds of endocytosis helps maintain concentration gradients 1. phagocytosis “cell eating” esp macrophages fuses with lysosome for digestion able to move things in or out quickly counteracts diffusion eg. Na/K pump ! roles in 2. pinocytosis “cell drinking” Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 5 Secretion Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 6 Membrane Potential a specific “application” of membrane transport “application” of membrane transport many body cells function in secretion all cells are polarized ! separation of charge !correlated with number of golgi bodies more “+” charges on outside more “-“ charges on inside either as individual gland cells or as components of multicellular glands determined mainly by differing concentrations of Na+, K+, Cl-, & proteins- glandular secretions can be through a tube or passageway = exocrine glands this separation of charge creates a voltage difference (=potential) across the membrane or directly into blood capillaries = endocrine glands eg. as in a battery examples of materials secreted: varies between -20mv to –200mv 1. sweat exists across all cell membranes ! temperature homeostasis this difference on nerve and muscle cells = resting potential 2. oils and fats ! scents, lubrication, protection, waterproofing ! because they can alter it 3. mucus ! protection, trap pathogens 4. collagen and various fibers ! important components of connective tissues 5. digestive enzymes 6. hormones Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 7 Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 8 The Cell Cycle & Cell Division eg. humans: ~100 trillion ! repair or replace damaged cells Cell Cycle cells lining intestine must be replaced ~ every 3 days the cell cycle is the life cycle of a cell: from its formation until it divides or dies red blood cells are replaced every 3 months ! each day ~50 Billion body cells die and are replaced each new cell must receive: cell cycle typically involves a period of interphase alternating with a period of cell division !a complete set of instructions (chromosomes, genes, DNA) !and a basic assortment of cellular structures to continue this metabolism Intephase two basic types of cell division: during most of a cell’s “life” (cycle) it performs its specialized functions and activities Mitosis we’ve defined what some of those “normal” activities are = “normal” metabolism makes identical copies of cells ! parent cell is genetically identical to the two daughter cells produced (clone) Cell Division at one or more points during its life it must reproduce to make copies of itself almost every cell in your body is essentially a clone of the original fertilize egg only difference is which genes are “switched on” ! determines what it has specialized into ! for growth (># of cells) all life begins as a single cell Meiosis in complex organisms that single cell grows and divides repeatedly to form a complex multicellular organism the formation of egg and sperm require a different 9 Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 kind of cell division in which the daughter cells contain only a single set (23) of chromosomes only sex cells (eggs and sperm) are formed by Meiosis 10 Mitosis Interphase the nondividing stage of a cells life cycle = interphase normal metabolism characteristic of the cell occurs here as the cell approaches time to divide: it begins to duplicate all the organelles and materials the new cells will need to get started it also must duplicate the genetic instructions (chromosomes) that will be needed the chromosomes are replicated during interphase ! this process in not visible to us DNA Replication 1. DNA in each chromosome unzips 2. an enzyme, DNA polymerase, collects the proper nucleotides from its surroundings and uses each strand as a template to build 2 new complementary strands replication progresses at a rapid pace: eg. eucaryotes ! 200 nucleotides/sec occasionally errors are made another group of enzymes “edits” and corrects those errors Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 11 Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 12 Stages of Mitosis cytokinesis doesn’t always occur during mitosis after DNA is replicated, the cell begins the division process that becomes visible (under a microscope and special stains) as a series of distinct stages or phases called Mitosis eg coenocytic striated muscle cells, no cytokinesis) The end result of mitosis: 1 parent cell produces two daughter cells mitosis in most human cells typically takes ~ 1-2 hours each new daughter cell has the 1. Prophase same # nuclear membrane disappears nucleoli disappear chromosomes begin to appear centrioles split and begins to form spindle same kinds of chromosomes as the original parent cell 2. Metaphase Variations in the Cell Cycle spindle is fully formed replicated chromosomes (2 chromatids) line up along the center of cell (equatorial plane) 3. Anaphase many cells are dividing about every 30 minutes b. in adults cell cycles vary considerably between different organs and tissues: 4. Telophase the chromosomes reach opposite sides of cell begin to disappear (no longer visible) the nucleus reforms the spindle disappears telophase is end of nuclear division; overlaps with… cytokinesis ! division of the cytoplasm = the cell splits (pinches) into two separate cells lifespan of some human cells: inner gut epithelium skin red blood cells bone intercostals muscle cells 13 Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 ! 15.9 yrs c. some cells divide only irregularly or as needed in adult life ! ! ! ! ! 5 days 2 weeks 120 days 10 yrs 15.1 yrs Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 14 eg. embryo has webbing between digits this normally goes away as cells between digits die eg. causes shrinkage of uterus after pregnancy ends eg. immune cells can trigger cancer cells to commit suicide by apoptosis eg. liver & kidney cells only divide if repair is needed d. the length of a the cell cycle varies greatly from one cell to another a. during development, most cell cycles are relatively short centromere splits and chromatids (each half of the replicated chromosome) separate and begins to migrate toward the opposite side of the cell (now each chromatid = chromosome) gut cells (not lining) and some cells stop dividing shortly after birth ! divide little all our adult lives eg. muscle cells, nerve cells an inability to stop cycling at a rapid rate is a characteristic of cancer cells Cell Death (Apoptosis) Apoptosis = programmed cell death normal death of cells that have completed their function programmed cell death plays a crucial role in growth and development may also play a role in maintaining normal cell lines by killing off unneeded cells billions of cells die every hour by apoptosis ! don’t trigger inflammation since cell contents never escape; cell is engulfed by WBC’s eg. embryo produces ~ twice as many neurons as we need those that make connections survive, those that don’t die Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 15 Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 16 Cell Metabolism decomposition of organic polymers occurs through Hydrolysis metabolism refers to all the 1000’s of chemical reactions that are occurring within a cell Metabolism = Anabolism + Catabolism there are two basic kinds of reactions: most of these reactions require a specific enzyme in order to occur Anabolic Reactions & Catabolic Reactions Characteristics of Enzymes: 1. Anabolic Reactions (Anabolism) 1. all enzymes are proteins refer to all the synthesis reactions occurring in the cell 2. each reaction has a specific enzyme that catalyzes it !synthesis reactions make bonds 3. enzymes (and all proteins) are very sensitive to environmental conditions !synthesis reactions require or store energy synthesis of organic polymers occurs by dehydration synthesis each enzyme operates under a narrow range of conditions 2. Catabolic Reactions (Catabolism) refer to all the decomposition reactions occurring in the cell !decomposition reactions generally break bonds 5. enzymes are very efficient: eg. a single enzyme molecule can cause 17 300-400 reactions/ second 6. because they are used over and over and are very efficient, enzymes are needed in only very low amounts 7. some enzymes require coenzymes or cofactors 18 Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 Compartmentalization of cells helps to organize enzyme activities and makes them more efficient eg. aerobic respiration ! mitochondria eg. lipid synthesis ! endoplasmic reticulum ATP & Energy Use coenzymes = essential organic compounds many are called vitamins that cannot be made by body ATP is the immediate source of energy for cells eg. NAD, FAD, NADP, etc the energy released by catabolism of glucose is absorbed by ATP or cofactors = inorganic metal or ion required for proper configuration of active site ATP then transfers this energy to various cell processes that require it 1. Active Transport and Bulk Transport eg. Fe, Zn, Mg, etc moving things in and out of cell against concentration gradients Metabolic Pathways 2. Bioelectricity Metabolism in most cells is a collection of groups of enzymes working together this produces the ability to produce and conduct a nerve impulse along a neuron 3. Movement many of the reactions occurring in cells occur in a sequential, stepwise fashion contraction of muscle cells requires large amounts of ATP also beating of cilia and flagella and the amoeboid movement of WBC’s = metabolic pathways Most chemical reactions and entire metabolic pathways that occur in cells are reversible: 4. Anabolic Reactions (biosynthesis) the formation of new organic molecules requires ATP since new bonds are made ATP is a special energy transfer molecule same enzyme may catalyze reaction in either direction Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 4. enzymes are not used up in reactions they can be used over and over again E + Substrate ! ES Complex ! E + Product !decomposition reactions generally release energy Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 since the shape of the enzyme is due mainly to weak hydrogen bonds 19 Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 20 it can easily absorb energy from the breakdown of organic molecules and release energy for various cellular processes ! its bonds easily store and release energy Cellular Interactions the 100 trillion cells in the body must be able to communicate and interact with each other to coordinate their activities !need to be able to “talk” to each other ATP exists mainly in two forms: high energy ATP lower energy ADP Cell Receptor Molecules =adenosine triphosphate: A~P~P~P a diverse group of chemicals, mainly proteins, on cell’s surface act as receptors or binding sites high energy bonds each receptor reacts to a specific chemical between the phosphorus atoms are “high energy” bonds specific chemicals bind to receptors on or in cell to cause change in cell function ATP absorbs energy by forming these bonds ! ! ! ! ! ATP releases energy by breaking these bonds ! release 4-6 x’s more energy than that released when “ordinary” bonds are broken cell only responds to a chemical if it has the correct receptor protein ! target cell ATP ADP ATP releases energy cause cell to change metabolism cause cells to secrete a product cause a cell to divide or prevent it from dividing cause a nerve cell to fire an impulse cause a muscle cell to contract ATP stores energy different cells respond in different ways to same chemical AMP eg. ACh Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 21 ! stim skeletal muscle cells ! inhibits heart muscle cells Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 22 Cellular Control: Genes & Chromosomes Many different kinds of chemicals can be used for signaling: the cell is a bag of controlled chemical reactions eg. neurotransmitters eg. hormones eg. tissue hormones these reactions are controlled by the DNA of the chromosomes in the nucleus of the cell on these chromosomes are the genetic instructions that control everything the cell does each instruction = gene (human cells contain ~22,000 different genes) each gene is a unit of inheritance each chromosome contains many genes (~500-600 genes/chromosome) almost all reactions occurring in a cell require a specific enzyme to occur all enzymes are proteins therefore, if you control protein synthesis you can regulate all metabolism a typical cell is continually producing 100’s of different kinds of proteins, many of them are enzymes Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 23 Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 24 as an enzyme is needed the gene(s) is (are) activated and the required protein (enzyme) is made Two problems with protein synthesis: what is the “code” contained on the mRNA molecule 1. DNA is in chromosome in nucleus and proteins are made at ribosome Triplet Code ! how does info move from nucleus to ribosomes? 4 nucleotides must code for 20 different amino acids: 2. proteins consist of a series of 20 different kinds of amino acids nucleic acids are a series of only 4 kinds of nucleotides ! how do 4 different nucleotides code for 20 different amino acids if 1 nucleotide codes for 1 amino acid ! could only get 4 different AA’s if 2 nucleotides codes for 1 amino acid ! could get no more than 16 different AA’s if 3 nucleotides code for 1 amino acids ! can get 64 different combinations more than enough for the 20 AA’s plus some extra for punctuation protein synthesis is a 2 step process: transcription translation the code is nearly universal (bacteria to humans) ! all life is interrelated involves a second group of nucleic acids = RNA translation is the process by which the genetic code on the RNA is converted to a specific sequence of amino acids at the ribosome Transcription RNA copies the code on the gene in the DNA molecule each strand of RNA may be used to make several copies of the same protein based on complementary bonds a sequence of nucleotides on a DNA (=gene) acts as a template for synthesis of RNA strand eventually mRNA is degraded into constituent nucleotide Translation Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 RNA moves out to ribosomes and directs the construction of a specific protein using other RNAs 25 Microscopy & Cells: Cell Function; Ziser Lecture Notes, 2005 26